Preheat the oven to 350°F and spray a 12-cup silicone or metal muffin pan with cooking spray.
Add the eggs, cottage cheese, salt, and pepper to a high-speed blender and blend on high until smooth and combined.
Divide the egg mixture evenly between the muffin cups filling each one a little more than halfway full. Make sure not to overfill them. Top each egg bite with some bacon, cheddar cheese, and chives.
Bake the egg bites for 22-25 minutes until the eggs are set and the edges are golden. Remove and let cool.
Carefully remove the egg bites from the pan and enjoy!
