Preheat oven to 375°F and grease a 12-cup muffin tin.
Whisk eggs, cottage cheese, salt, and pepper in a large bowl.
Fold in shredded cheese, vegetables, and cooked bacon.
Pour evenly into muffin cups (about ¾ full).
Bake 20–25 minutes until golden and set.
Cool slightly before removing and serve warm.
